All Of Our Groups

healthcare

ScientificLead,GenerativeAIEngineer,AppliedIntelligenceforDiscovery

$182–284k San Francisco, California, United States FULL TIME
The Brief

“Scientific Lead, Generative AI Engineer, Applied Intelligence for Discovery at All Of Our Groups. Skills: Generative AI, LLM, RAG, text-to-SQL, agentic workflows, Python, LLM ecosystem, evaluation frameworks. Design, build, and operate the core AI systems. retrieval-augmented generation over internal scientific documents”

Industry & Context.

healthcare
Problems you'll solve

complex scientific queries

What They're Looking For.

Must Have

PhD in Computer Science, Data Science, or a related technical field with 0-3+ years of or equivalent experience building production LLM, MS in Computer Science, Data Science, or a related technical field with 5+ years of or equivalent experience building production LLM systems

Nice to Have

Experience building LLM-powered applications, including at least two of: RAG systems, text-to-SQL, agentic workflows, or fine-tuning pipelines, software engineering skills in Python with experience building production-grade systems, Deep familiarity with the modern LLM ecosystem: embedding models, vector databases, and orchestration frameworks, Experience designing evaluation frameworks for LLM systems — systematic approaches to measuring accuracy, detecting hallucinations, and tracking regressions, Comfort working with complex, heterogeneous data — databases with hundreds of tables, specialized schemas, or domain-specific vocabularies, Familiarity with cloud computing environments (AWS preferred), containerization (Docker), and CI/CD practices, Experience in pharmaceutical, biotech, or life sciences environments, Familiarity with biomedical data types (omics, clinical, molecular) or scientific databases, Experience with MLOps/LLMOps tooling: experiment tracking, model registries, prompt versioning, A testing for AI systems, Knowledge of biomedical ontologies (Gene Ontology, MeSH, ChEBI) or experience integrating domain-specific knowledge into LLM systems, Experience building for regulated environments where auditability, reproducibility, and explainability are requirements

What You'll Do.

and operate the core AI systems

retrieval-augmented generation over internal scientific documents

text-to-SQL over complex omics databases

agentic workflows that automate multi-step analyses

evaluation infrastructure that enable the next-generation of medicines for patients

and optimize RAG pipelines over internal publications

electronic lab notebooks

and other scientific documents

Build hybrid retrieval systems combining vector search with structured metadata

and ontology-aware filtering

Build and optimize text-to-SQL systems over Lilly’s databases

enabling scientists to query gene expression

and variant data through natural language

Develop schema documentation

and gold-standard question/SQL pairs that bridge how scientists think about data and how it is stored

Implement multi-step reasoning approaches (chain-of-thought

Reflexion loops) to improve accuracy on complex scientific queries

Design agentic AI workflows that chain database queries

and visualization into automated multi-step scientific analyses

Evaluate and integrate emerging orchestration frameworks (LangGraph

custom architectures) for scientific use cases

Build evaluation frameworks measuring accuracy

and scientific validity of AI outputs

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