Lilly

Healthcare

Advisor-AntibodyDevelopabilityValidation&Benchmarking

$167–266k Boston, Massachusetts, United States FULL TIME
Market Sentiment
HIGH DEMAND

Neural analysis suggests this role is
optimal for Senior candidates.

The Brief

“Advisor - Antibody Developability Validation & Benchmarking at Lilly. Skills: Antibody developability, Model validation, Benchmarking, Federated learning. Build antibody developability benchmark suite. Define endpoint evaluation strategy”

What You'll Achieve.

Establish trust in federated antibody models; Triage real candidates; Contribute to model design choices; Deliver measurable lift over baselines; Simulate prospective deployment; Detect concept drift; Surface systematic failure modes; Communicate systematic biases; Communicate failure modes

Industry & Context.

Healthcare
Problems you'll solve

Root cause analysis; Troubleshooting; Bias identification; Failure mode identification

Eligibility Requirements

Up to 10% travel

What They're Looking For.

Must Have

PhD in Computational Biology, PhD in Bioinformatics, PhD in Computer Science, PhD in related quantitative field, Publications on antibody developability prediction, Publications on model validation, Publications on benchmarking, Publications on reproducibility, Technical writing skills for partner-facing model cards, Technical writing skills for validation reports

Nice to Have

MLflow proficiency, Weights & Biases proficiency, Portfolio mindset balancing rigorous validation, Portfolio mindset balancing rapid deployment

What You'll Do.

Build antibody developability benchmark suite

Define endpoint evaluation strategy

Define multi-endpoint reliability roll-up

Architect privacy-preserving test set protocols

Design test set splitting strategies

Account for data asymmetry in test sets

Benchmark federated models against external resources

Characterize generalization gaps

Quantify federated training lift

Develop validation strategies across modalities

Develop validation strategies across formats

Implement temporal-split validation protocols

Implement sequence-similarity-aware validation protocols

Simulate prospective deployment

Surface systematic failure modes

Partner on architectural choices

Partner on feature choices

Partner on uncertainty quantification

Partner on calibration strategies

Partner on representation choices

Design statistically powered validation studies

Account for multiple testing

Account for hierarchical structure

Account for non-independent observations

Provide confidence intervals

Build MLOps pipelines

Ensure reproducibility of federated experiments

Version data snapshots

Version model checkpoints

Version hyperparameter configurations

Develop performance profiling

Identify systematic biases

Identify failure modes

Communicate findings to partners

Integrate validation frameworks with platform

Ensure scalable automated testing

How You'll Work.

Team & Collaboration

Partner with antibody modeling scientists; Collaborate with engineering teams

Communication Scope

Technical writing; Partner-facing reports

Process & Methodology

Portfolio mindset

Full Job Description

At Lilly, we unite caring with discovery to make life better for people around the world. We are a global healthcare leader headquartered in Indianapolis, Indiana. Our employees around the world work to discover and bring life-changing medicines to those who need them, improve the understanding and management of disease, and give back to our communities through philanthropy and volunteerism. We give our best effort to our work, and we put people first. We’re looking for people who are determined to make life better for people around the world. **O rganization Overview** At Lilly, we serve an extraordinary purpose. We make a difference for people around the globe by discovering, developing and delivering medicines that help them live longer, healthier, more active lives. Not only do we deliver breakthrough medications, but you also can count on us to develop creative solutions to support communities through philanthropy and volunteerism. **Purpose** Lilly TuneLab is an AI-powered drug discovery platform that provides biotech companies with access to machine learning models trained on Lilly's extensive proprietary pharmaceutical research data. Through federated learning, the platform enables Lilly to build models on broad, diverse datasets from across the biotech ecosystem while preserving partner data privacy and competitive advantages. Antibody developability prediction is a core workstream within TuneLab — covering aggregation, self-association, polyspecificity, thermal stability, viscosity, and chemical liabilities — that gates progression from discovery into lead optimization, cell line development, and formulation. The Advisor/Senior Advisor - Antibody Developability Validation & Benchmarking plays an essential role in establishing whether TuneLab's federated antibody models can be trusted to triage real candidates. The person in this seat must understand, at depth, how antibodies are characterized, what makes a sequence developable or not, and how predictions f

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